Recent Publications & Industry Work

The CBM partner institutions have a long track-record of high-level research production and working collaboratively with industry and government partners.

CBM-relevant publications, Jan. 2017 through July 2018

Recent examples of industry work include:

Purdue – Merck Top-Down Interrogation of Chemically Modified Oligonucleotides by Negative Electron Transfer and Collision Induced Dissociation, Gao, Y.; Yang, J.; Cancilla, M. T.; Meng, F. Y.;
McLuckey, S. A., Analytical Chemistry 85, 4713-4720, 2013.

Indiana – Amgen Distinguishing Aspartic and Isoaspartic Acids in Peptides by Several Mass Spectrometric Fragmentation Methods, DeGraan-Weber, N.; Zhang, J.; Reilly, J. P., Journal of the American Society for Mass Spectrometry 27, 2041-2053, 2016.

Purdue – Siemens Tumor Cell Detection by Mass Spectrometry Using Signal Ion Emission Reactive Release Amplification, Zane Baird, Valentina Pirro, Stephen Ayrton, Adam Hollerbach, Cathleen Hanau, Karen Marfurt, Mary Foltz, R. Graham Cooks, and Michael Pugia, Analytical Chemistry 88, 6971–6975, 2016.

Notre Dame – Eli Lilly Zhao, Y. M.; Sun, L. L.; Knierman, M. D.; Dovichi, N. J., Fast separation and analysis of reduced monoclonal antibodies with capillary zone electrophoresis coupled to mass spectrometry, Talanta, 148, 529-533, 2016.

Purdue – AbbVie – Formulatrix Song, Z.; Sarkar, S.; Vogt, A.D.; Danzer, G.D.; Smith, C.J.; Gualtieri, E. J.; Simpson, G.J. Kinetic modeling of accelerated stability testing enabled by second harmonic generation microscopy. in press, Analytical Chemistry, 2018.

Notre Dame – Bruker In vivo X-Ray Computed Tomographic Imaging of Soft Tissue with Native, Intravenous, or Oral Contrast. Sensors, Wathen, C. A.; Foje, N.; van Avermaete, T.; Miramontes, B.; Chapaman, S. E.; Sasser, T. A.; Kannan, R.; Gerstler, S.; Leevy, W. M., Sensors 13, 6957-6980, 2013.

Purdue – Argonne National Laboratory Dynamic X-Ray Diffraction Sampling for Protein Crystal Positioning, Scarborough, N.M.; Godaliyadda, H.M.D.; Ye, D.H.; Kissick, D.J.; Zheng, S.J.; Newman, J.A.; Sheedlo, M.J.; Chowdhury, A.U.; Fischetti, R.F.; Das, C.; Buzzard, G.T.; Bouman, C.A.; Simpson, G.J., J. Synchrotron Rad. 24, 188-95, 2016.

Indiana – AB SCIEX Examining the Influence of Phosphorylation on Peptide Ion Structure by Ion Mobility Spectrometry-Mass Spectrometry, Glover, M. S.; Dilger, J. M.; Acton, M. D.; Arnold, R. J.; Radivojac, P.; Clemmer, D. E., Journal of the American Society for Mass Spectrometry, 27, 786-794, 2016.

Purdue – Waters Uncatalyzed, Regioselective Oxidation of Saturated Hydrocarbons in an Ambient Corona Discharge, S. T. Ayrton, G. R. Jones, D. Douce, M. Morris, R. G. Cooks, Angewandte Chemie, International Edition 57, 769-773, 2017.

Notre Dame – MedImmune A rapid cIEF-ESI-MS/MS method for host cell protein analysis of a recombinant human monoclonal antibody, Zhu, G. J.; Sun, L. L.; Wojcik, R.; Kernaghan, D.; McGivney, J. B.; Dovichi, N. J., Talanta, 98, 253-256, 2012.

Purdue – L’Oreal Rapid discrimination of bacteria using a miniature mass spectrometer, Christopher J. Pulliam, Pu Wei, Dalton T. Snyder, Xiao Wang, Zheng Ouyang, Rafal M. Pielak and R. Graham Cooks, Analyst 141,1633-1636, 2016.

Notre Dame – Genentech Monitoring the Uptake of Glycosphingolipids In Plasmodium
falciparum-Infected Erythrocytes Using Both Fluorescence Microscopy and Capillary Electrophoresis with Laser-Induced Fluorescence Detection, Essaka, D. C.; White, J.; Rathod, P.; Whitmore, C. D.; Hindsgaul, O.; Palcic, M. M.; Dovichi, N. J., Analytical Chemistry 82, 9955-9958, 2010.

Purdue – Argonne National Laboratory Second harmonic generation imaging of local electric fields resulting from synchrotron X- ray exposure, Dettmar, C.M.; Newman, J.A.; Toth, S.J.; Becker, M.; Fischetti, R.F.; Simpson, G.J. Proceedings of the National Academy of Sciences 112, 696-701, 2015.

Indiana – Purdue – Amgen Immunogenicity of Therapeutic Protein Aggregates, Moussa, E. M.; Panchal, J. P.; Moorthy, B. S.; Blum, J. S.; Joubert, M. K.; Narhi, L. O.; Topp, E. M., Journal of Pharmaceutical Sciences, 105, 417-430, 2016.

Purdue – Creare Design of Portable Mass Spectrometers with Handheld Probes: Aspects of the Sampling and Miniature Pumping Systems, Chien-Hsun Chen, Tsung-Chi Chen, Xiaoyu Zhou, Robert Kline-Schoder, Paul Sorensen, R. Graham Cooks and Zheng Ouyang, Journal of the American Society for Mass Spectrometry 26, 240-247, 2015.

Notre Dame – Eli Lilly Fast Top-Down Intact Protein Characterization with Capillary Zone Electrophoresis-Electrospray Ionization Tandem Mass Spectrometry, Sun, L. L.; Knierman, M. D.; Zhu, G. J.; Dovichi, N. J. Analytical Chemistry 85, 5989-5995, 2013.

Purdue – GlaxoSmithKline Analysis of Therapeutic Drugs in Dried Blood Spot Samples by Paper Spray Mass Spectrometry: An . Manicke, N. E.; Abu-Rabie, P.; Spooner, N.; Ouyang, Z.; Cooks, R. G., Quantitative Journal of the American Society for Mass Spectrometry 22, 1501-1507, 2011.