{"id":32,"date":"2025-09-26T09:34:26","date_gmt":"2025-09-26T13:34:26","guid":{"rendered":"https:\/\/sites.nd.edu\/gtimp-lab\/?page_id=32"},"modified":"2026-02-24T14:27:59","modified_gmt":"2026-02-24T19:27:59","slug":"publications","status":"publish","type":"page","link":"https:\/\/sites.nd.edu\/gtimp-lab\/?page_id=32","title":{"rendered":"PUBLICATIONS"},"content":{"rendered":"\n

LASER GUIDED ASSEMBLY OF METAMATERIALS<\/strong><\/p>\n\n\n\n

Paul A, Timp G, “How to Manufacture Photonic Metamaterials”, Advanced Materials Technologies, 2025, doi: 10.1002\/admt.202500313 Link to publication<\/a>.<\/a><\/p>\n\n\n\n

Paul A, Volk A, Hokmabadi M, Rigo E, Kermani H, Almonte-Garcia L, Finamore T, Iwamoto K, Roeder R, Timp G, “Modular Assembly of Metamaterials Using Light Gradients”, Advanced Materials 2024, doi.org\/10.1002\/adma.202401344 Link to publication.<\/a><\/p>\n\n\n\n

Perry N, Kennedy EM, Timp G, “Wiring Together Synthetic Bacterial Consortia to Create a Biological Integrated Circuit”, ACS Synthetic Biology 2016, doi:10.1021\/acssynbio.6b00002 Link to publication.<\/a><\/p>\n\n\n\n

PROTEIN SEQUENCING<\/strong><\/p>\n\n\n\n

Paul A, Rayabharam A, Almonte L, Rigo E, Joseph J, Kumar A, Dong Z, Aluru N, and Timp G, “Peptide Sequencing With Single Acid Resolution Using a Sub-Nanometer Diameter Pore” Adv. Funct. Mater. 2025, e15800 e15800, DOI: 10.1002\/adfm.202515800 Link to publication.<\/a><\/p>\n\n\n\n

Berger, Michael, “Reading peptides one amino acid at a time through a sub-nanometer pore”, Nanowerk, 24 February 2026. Link to publication.<\/a><\/p>\n\n\n\n

Timp W, and Timp G, “Beyond Mass Spectrometry, the Next Step in Proteomics” Science Advances, published online 10 January 2020. doi: 10.1126\/sciadv.aax8978. Link to publication.<\/a><\/p>\n\n\n\n

Rigo E, Dong Z, Park JH, Kennendy E, Hokmabadi M, Almonte-Garcia L, Ding L, Aluru N, and Timp G, “Measurements of the Size and Correlations between Ions using an Electrolytic Point Contact” Nature Communications, published online 30 May 2019. doi: 10.1038\/s41467-019-10265-2. Link to publication.<\/a><\/p>\n\n\n\n

Liu X, Dong Z, and Timp G, “Calling the amino acid sequence of a protein\/peptide from the nanospectrum produced by a sub-nanometer diameter pore”, published online 25 October 2022. doi: doi.org\/10.1038\/s41598-022-22305-x. Link to publication.<\/a><\/p>\n\n\n\n

Dong Z, Kennedy E, Hokmabadi M, and Timp G, “Discriminating Residue Substitutions in a Single Protein Molecule Using a Sub-nanopore” ACS Nano, published online 24 May 2017. doi: 10.1021\/acsnano.6b08452. Link to publication.<\/a><\/p>\n\n\n\n

Kennedy E, Dong Z, Tennant C, and Timp G, “Reading the primary structure of a protein with 0.07 nm3<\/sup> resolution using a subnanometre-diameter pore” Nature Nanotechnology, published online 25 July 2016. doi: 10.1038\/NNANO.2016.120. Link to publication.<\/a><\/p>\n\n\n\n

Eisenstein M, “Teaching nanopores to speak protein” Nature Methods 13, 715 (2016) doi: 10.1038\/nmeth.3988. Link to publication.<\/a><\/p>\n\n\n\n

Kolmogorov M, Kennedy E, Dong Z, Timp G, Pevzner P, “Single-Molecule Protein Identification by Sub-Nanopore Sensors” PLOS Computational Biology doi: https:\/\/doi.org\/10.1371\/hournal.pcbi.1005356. Link to publication.<\/a><\/p>\n\n\n\n

Bonislawski A, “Nanopore-Based Proteome Profiling Within Reach, Study Suggests” Genome Web (2017). Link to publication.<\/a><\/p>\n\n\n\n

Ramsey D, “Nanopore Technology Makes Leap from DNA Sequencing to Identifying Proteins” Jacobs School of Engineering (2017). Link to publication.<\/a><\/p>\n\n\n\n

LIVE CELL IMAGING<\/strong><\/p>\n\n\n\n

Kennedy E, Nelson E, Tanaka T, Damiano J, Timp G, “Live Bacterial Physiology Visualized with Five-Nanometer Resolution Using Scanning Transmission Electron Microscopy”, ACS Nano 2016, doi: 10.1021\/acsnano.5b07697 Link to publication.<\/a><\/p>\n\n\n\n

Kennedy E, Nelson E, Tanaka T, Damiano J, Timp G, “Gene Expression in Electron-Beam-Irradiated Bacteria in Reply to ‘Live Cell Electron Microscopy is Probably Impossible'” ACS Nano 2017, doi: 10.1021\/acsnano.6b06616. Link to publication.<\/a><\/p>\n\n\n\n

SINGLE CELL<\/strong> SPECTROSCOPY<\/strong><\/p>\n\n\n\n

Article Kennedy E, Hokmabadi M, Dong Z, McKelvey K, Nelson EM, Timp G, “Method for Dynamically Detecting Secretions from Single Cells Using a Nanopore” Nanoletters, 2018. doi: 10.1021\/acs.nanolett.8b01257. Link to publication.<\/a><\/p>\n\n\n\n

Kurz V, Tanaka T, Timp G, “Single Cell Transfection with Single Molecule Resolution Using a Synthetic Nanopore” Nanoletters, 2014. doi: 10.1021\/nl403789z. Link to publication.<\/a><\/p>\n\n\n\n

Sarveswaran K, Kurz V, Dong Z, Penny S, Tanaka T, Timp G, “Synthetic Capillaries to Control Microscopic Blood Flow”, Scientific Reports 2016, doi:10.1038\/srep21885 Link to publication.<\/a><\/p>\n\n\n\n

Nelson EM, Mirsaidov U, Sarveswaran K, Perry N, Kurz V, Timp W, Timp G, “Ecology of a Simple Synthetic Biofilm”, The Physical Basis of Bacterial Quorum Communication Biological and Medical Physics, Biomedical Engineering 2015, pp 205-226, doi: 10.1007\/978-1-4939-1402-9_11# Link to publication.<\/a><\/p>\n\n\n\n

Kurz V, Nelson EM, Perry N, Timp W, Timp G, “Epigenetic Memory Emerging from Integrated Transcription Bursts”, Biophys. J. 2013, 105, 6. doi: 10.1016\/j.bpj.2013.08.010. Link to publication.<\/a><\/p>\n\n\n\n

Nelson EM, Kurz V, Perry N, Kyrouac D, Timp G, “Biological Noise Abatement: Coordinating the Responses of Autonomous Bacteria to a Fluctuating Environment Using a Stochastic Bistable Switch”, ACS Synthet. Biol. 2014,doi: 10.1021\/sb400052f Link to publication.<\/a><\/p>\n\n\n\n

Lin C, Kolossov VL, Tsvid G, Trump L, Henry JJ, Henderson JL, Rund LA, Kenis PJA, Schook LB, Gaskins HR, Timp G, “Imaging in real-time with FRET the redox response of tumorigenic cells to glutathione perturbations in a microscale flow” Integrative Biology, 2010, doi: 10.1039\/C0IB00071J. Link to publication.<\/a><\/p>\n\n\n\n

Timp W, Mirsaidov U, Matsudaira P, Timp G, “Jamming Prokaryotic Cell-to-Cell Communications in a Model Biofilm”, Lab Chip, 2009. doi: 10.1039\/b810157d. Link to publication.<\/a><\/p>\n\n\n\n

Mirsaidov U, Timp W, Timp K, Mir M, Matsudaira P, Timp G, “An Optimal Optical Trap for Bacterial Viability”, Phys. Rev. E, 2008, 78, 2, 021910. doi: 10.1103\/ PhysRevE.78.021910. Link to publication.<\/a><\/p>\n\n\n\n

Mirsaidov U, Scrimgeour J, Timp W, Timp K, Mir M, Matsudaira P, Timp G, “Live Cell Lithography: Using Optical Tweezers to Create Synthetic Tissue”, Lab on a Chip, 2008. doi: 10.1039\/B807987K. Link to publication.<\/a><\/p>\n\n\n\n

\"biophysical\"<\/figure>\n\n\n\n

Akselrod GM, Timp W, Mirsaidov U, Zhao Q, Li C, Timp R, Timp K, Matsudaira P, Timp G, “Laser-Guided Assembly of Heterotypic 3D Living Cell Microarrays”, Biophys. J. 2006 91 (9): 3465-3473. doi: 10.1529\/biophysj.106.084079. Link to publication<\/a>.<\/a><\/p>\n\n\n\n

NANOTRANSISTORS<\/strong><\/p>\n\n\n\n

Barei\u00df M, Ante F, K\u00e4lblein D, Jegert G, Jirauschek C, Scarpa G, Fabel B, Nelson EM, Timp G, Zschieschang U, Klauk H, Porod W, Lugli P, \u201cHigh-Yield Transfer Printing of Metal-Insulator-Metal Nanodiodes\u201d ACS Nano, March 2012, vol. 6, no. 3, 2853-2859. Link to publication.<\/a><\/p>\n\n\n\n

Dimitrov V, Heng JB, Timp K, Dimauro O, Chan R, Hafez M, Feng J, Sorsch T, Mansfield W, Miner J, Kornblit A, Klemens F, Bower J, Cirelli R, Ferry EJ, Taylor A, Feng M, Timp G, “Small-signal performance and modeling of sub-50nm nMOSFETs with fT above 460-GHz”, Solid State Electronics, 2008, 52, 6, 899-908. Link to publication.<\/a><\/p>\n\n\n\n

Timp G, Bude J, Baumann F, Bourdelle KK, Boone T, Garno J, Ghetti A, Green M, Gossmann H, Kim Y, Kleiman R, Kornblit A, Klemens F, Moccio S, Muller D, Rosamilia J, Silverman P, Sorsch T, Timp W, Tennant D, Tung R, Weir B, “The relentless march of the MOSFET gate oxide thickness to zero”, Proceedings Microelectronics Reliability, 2000, 40, 4-5, 557-562. doi:10.1016\/S0026-2714(99)06257-7. Link to publication<\/a>.<\/a><\/p>\n\n\n\n

Muller DA, Sorsch T, Maccio S, Baumann FH, Evans-Lutterodt K, Timp G, “The electronic structure at the atomic scale of ultrathin gate oxides” Nature, 1999, 399:6738, 758-761. Link to publication.<\/a><\/p>\n\n\n\n

<\/p>\n","protected":false},"excerpt":{"rendered":"

LASER GUIDED ASSEMBLY OF METAMATERIALS Paul A, Timp G, “How to Manufacture Photonic Metamaterials”, Advanced Materials Technologies, 2025, doi: 10.1002\/admt.202500313 Link to publication. Paul A, Volk A, Hokmabadi M, Rigo E, Kermani H, Almonte-Garcia L, Finamore T, Iwamoto K, Roeder R, Timp G, “Modular Assembly of Metamaterials Using Light Gradients”, Advanced Materials 2024, doi.org\/10.1002\/adma.202401344 Link … Continue reading “PUBLICATIONS”<\/span><\/a><\/p>\n","protected":false},"author":5046,"featured_media":0,"parent":0,"menu_order":0,"comment_status":"closed","ping_status":"closed","template":"","meta":{"_monsterinsights_skip_tracking":false,"footnotes":""},"class_list":["post-32","page","type-page","status-publish","hentry"],"yoast_head":"\nPUBLICATIONS - TIMP NANO-BIO LAB<\/title>\n<meta name=\"robots\" content=\"index, follow, max-snippet:-1, max-image-preview:large, max-video-preview:-1\" \/>\n<link rel=\"canonical\" href=\"https:\/\/sites.nd.edu\/gtimp-lab\/?page_id=32\" \/>\n<meta property=\"og:locale\" content=\"en_US\" \/>\n<meta property=\"og:type\" content=\"article\" \/>\n<meta property=\"og:title\" content=\"PUBLICATIONS - TIMP NANO-BIO LAB\" \/>\n<meta property=\"og:description\" content=\"LASER GUIDED ASSEMBLY OF METAMATERIALS Paul A, Timp G, “How to Manufacture Photonic Metamaterials”, Advanced Materials Technologies, 2025, doi: 10.1002\/admt.202500313 Link to publication. 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