{"id":190,"date":"2021-04-12T14:47:37","date_gmt":"2021-04-12T18:47:37","guid":{"rendered":"https:\/\/sites.nd.edu\/rcn-wastewater-sarscov2\/?page_id=190"},"modified":"2023-08-28T17:47:35","modified_gmt":"2023-08-28T21:47:35","slug":"data-sharing-resources","status":"publish","type":"page","link":"https:\/\/sites.nd.edu\/rcn-wastewater-sarscov2\/data-sharing-resources\/","title":{"rendered":"Data Sharing Resources"},"content":{"rendered":"\n<p class=\"wp-block-paragraph\">The RCN on Wastewater Surveillance for SARS-CoV-2 encourages laboratories to share their raw data in open data repositories when possible. Here we have collected resources to assist laboratories in data sharing &amp; deposition efforts. Resources here include data dictionaries &amp; reporting frameworks, data repositories, and databases.<\/p>\n\n\n\n<div class=\"wp-block-group has-light-gray-background-color has-background\"><div class=\"wp-block-group__inner-container is-layout-flow wp-block-group-is-layout-flow\">\n<p class=\"has-medium-font-size wp-block-paragraph\"><strong>Deposit your data in our figshare collection!<\/strong><\/p>\n\n\n\n<p class=\"wp-block-paragraph\">The RCN has developed a <a href=\"https:\/\/figshare.com\/collections\/Wastewater_Surveillance_for_SARS-CoV-2\/5280503\" data-type=\"URL\" data-id=\"https:\/\/figshare.com\/collections\/Wastewater_Surveillance_for_SARS-CoV-2\/5280503\">figshare collection<\/a> for SARS-CoV-2 wastewater data to serve as a resource for the research community to more easily locate, analyze, and share open source data. To include your data in our collection, upload it to <a href=\"https:\/\/figshare.com\/\" data-type=\"URL\" data-id=\"https:\/\/figshare.com\/\">figshare<\/a> and then fill out the <a href=\"https:\/\/forms.gle\/ZSzXeSh8EzRT9Krr7\" data-type=\"URL\" data-id=\"https:\/\/forms.gle\/ZSzXeSh8EzRT9Krr7\">submission form here<\/a>.<\/p>\n<\/div><\/div>\n\n\n\n<p class=\"wp-block-paragraph\"><\/p>\n\n\n\n<p class=\"has-medium-font-size wp-block-paragraph\"><strong>Topic-Specific Resources<\/strong><\/p>\n\n\n\n<p class=\"wp-block-paragraph\"><em><a href=\"https:\/\/doi.org\/10.1039\/D1EW00235J\" data-type=\"URL\" data-id=\"https:\/\/doi.org\/10.1039\/D1EW00235J\">RCN Data Sharing Standardization Guide<\/a><\/em><\/p>\n\n\n\n<ul class=\"wp-block-list\">\n<li>Peer-reviewed &amp; published framework for data reporting<\/li>\n\n\n\n<li>Provides a table of recommended metadata variables to include with wastewater surveillance efforts<\/li>\n<\/ul>\n\n\n\n<p class=\"wp-block-paragraph\"><em><a href=\"https:\/\/www.norman-network.com\/nds\/sars_cov_2\/\">NORMAN \/ SCoRE SARS-CoV-2 in Sewage (SC2S)<\/a><\/em><\/p>\n\n\n\n<ul class=\"wp-block-list\">\n<li>Open access database focused on European countries<\/li>\n\n\n\n<li>Provides a fillable Excel template<\/li>\n\n\n\n<li>Eligibility for inclusion in the database is determined on a case-by-case basis and must adhere to the provided Excel framework<\/li>\n<\/ul>\n\n\n\n<p class=\"wp-block-paragraph\"><em><a href=\"https:\/\/www.waterpathogens.org\/about-w-sphere\">Global Water Pathogens Project Wastewater SPHERE<\/a><\/em><\/p>\n\n\n\n<ul class=\"wp-block-list\">\n<li>Under development<\/li>\n\n\n\n<li>Expected to contain an open database for data analysis and deposition<\/li>\n<\/ul>\n\n\n\n<p class=\"wp-block-paragraph\"><em><a href=\"https:\/\/github.com\/Big-Life-Lab\/covid-19-wastewater\">Ottawa Wastewater Surveillance Data Model<\/a><\/em><\/p>\n\n\n\n<ul class=\"wp-block-list\">\n<li>Primarily a data reporting structure &amp; metadata dictionary for Canadian wastewater surveillance data<\/li>\n\n\n\n<li>Provides a fillable Excel template<\/li>\n<\/ul>\n\n\n\n<p class=\"wp-block-paragraph\"><em><a href=\"https:\/\/www.cdc.gov\/coronavirus\/2019-ncov\/cases-updates\/wastewater-surveillance\/data-reporting-analytics.html\">US CDC National Wastewater Surveillance System<\/a><\/em><\/p>\n\n\n\n<ul class=\"wp-block-list\">\n<li>Includes guidance on data collection, reporting, and analytics<\/li>\n\n\n\n<li>Data are managed in the DCIPHER platform, available only to US public health officials<\/li>\n<\/ul>\n\n\n\n<p class=\"has-medium-font-size wp-block-paragraph\"><strong>General Resources<\/strong><\/p>\n\n\n\n<p class=\"wp-block-paragraph\"><em>Institutional Repositories<\/em><\/p>\n\n\n\n<ul class=\"wp-block-list\">\n<li>Many institutions maintain open data repositories to house data from affiliated projects<\/li>\n\n\n\n<li>Check with your institution&#8217;s library or research staff<\/li>\n<\/ul>\n\n\n\n<p class=\"wp-block-paragraph\"><em><a href=\"https:\/\/figshare.com\/\">figshare<\/a><\/em><\/p>\n\n\n\n<ul class=\"wp-block-list\">\n<li>General open access repository for any type of data<\/li>\n\n\n\n<li>The RCN is maintaining a <a href=\"https:\/\/figshare.com\/collections\/Wastewater_Surveillance_for_SARS-CoV-2\/5280503\" data-type=\"URL\" data-id=\"https:\/\/figshare.com\/collections\/Wastewater_Surveillance_for_SARS-CoV-2\/5280503\">figshare collection<\/a> for SARS-CoV-2 wastewater surveillance data. See the information at the top of this page to submit your data to our collection.<\/li>\n<\/ul>\n\n\n\n<p class=\"wp-block-paragraph\"><em><a href=\"https:\/\/github.com\/\">GitHub<\/a><\/em><\/p>\n\n\n\n<ul class=\"wp-block-list\">\n<li>Open collaborative environment for sharing of data and processing pipelines<\/li>\n<\/ul>\n\n\n\n<p class=\"wp-block-paragraph\"><\/p>\n\n\n\n<div style=\"height:150px\" aria-hidden=\"true\" class=\"wp-block-spacer\"><\/div>\n\n\n\n<figure class=\"wp-block-image size-full\"><img loading=\"lazy\" decoding=\"async\" width=\"1000\" height=\"250\" src=\"http:\/\/sites.nd.edu\/rcn-wastewater-sarscov2\/files\/2023\/08\/RCN-Logo.png\" alt=\"\" class=\"wp-image-619\" srcset=\"https:\/\/sites.nd.edu\/rcn-wastewater-sarscov2\/files\/2023\/08\/RCN-Logo.png 1000w, https:\/\/sites.nd.edu\/rcn-wastewater-sarscov2\/files\/2023\/08\/RCN-Logo-300x75.png 300w, https:\/\/sites.nd.edu\/rcn-wastewater-sarscov2\/files\/2023\/08\/RCN-Logo-768x192.png 768w\" sizes=\"auto, (max-width: 1000px) 100vw, 1000px\" \/><\/figure>\n","protected":false},"excerpt":{"rendered":"<p>The RCN on Wastewater Surveillance for SARS-CoV-2 encourages laboratories to share their raw data in open data repositories when possible. Here we have collected resources to assist laboratories in data sharing &amp; deposition efforts. Resources here include data dictionaries &amp; reporting frameworks, data repositories, and databases. Deposit your data in our figshare collection! The RCN &hellip; <a href=\"https:\/\/sites.nd.edu\/rcn-wastewater-sarscov2\/data-sharing-resources\/\" class=\"more-link\">Continue reading <span class=\"screen-reader-text\">Data Sharing Resources<\/span><\/a><\/p>\n","protected":false},"author":3881,"featured_media":0,"parent":0,"menu_order":0,"comment_status":"closed","ping_status":"closed","template":"","meta":{"_monsterinsights_skip_tracking":false,"footnotes":""},"class_list":["post-190","page","type-page","status-publish","hentry"],"_links":{"self":[{"href":"https:\/\/sites.nd.edu\/rcn-wastewater-sarscov2\/wp-json\/wp\/v2\/pages\/190","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/sites.nd.edu\/rcn-wastewater-sarscov2\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/sites.nd.edu\/rcn-wastewater-sarscov2\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/sites.nd.edu\/rcn-wastewater-sarscov2\/wp-json\/wp\/v2\/users\/3881"}],"replies":[{"embeddable":true,"href":"https:\/\/sites.nd.edu\/rcn-wastewater-sarscov2\/wp-json\/wp\/v2\/comments?post=190"}],"version-history":[{"count":14,"href":"https:\/\/sites.nd.edu\/rcn-wastewater-sarscov2\/wp-json\/wp\/v2\/pages\/190\/revisions"}],"predecessor-version":[{"id":629,"href":"https:\/\/sites.nd.edu\/rcn-wastewater-sarscov2\/wp-json\/wp\/v2\/pages\/190\/revisions\/629"}],"wp:attachment":[{"href":"https:\/\/sites.nd.edu\/rcn-wastewater-sarscov2\/wp-json\/wp\/v2\/media?parent=190"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}