{"id":14,"date":"2018-05-08T13:54:30","date_gmt":"2018-05-08T17:54:30","guid":{"rendered":"http:\/\/sites.nd.edu\/samuel-rund\/?page_id=14"},"modified":"2025-02-10T21:00:42","modified_gmt":"2025-02-11T01:00:42","slug":"publications","status":"publish","type":"page","link":"https:\/\/sites.nd.edu\/samuel-rund\/publications\/","title":{"rendered":"Publications"},"content":{"rendered":"\n

View my profiles on:<\/strong> Google Scholar<\/a> | ORCID<\/a> | Research Gate<\/a><\/p>\n\n\n\n

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Carmela D’Antuono, Kayla Anderson, Joseph Afuso, Jennifer Robichaud, and Samuel S. C. Rund<\/strong>, \u201cMosquito Abundance and Species Surveillance in St. Joseph County, Indiana, 1976-1997<\/a>\u201d. Biodiversity Data Journal 12: e122215.  <\/p>\n\n\n\n

Rund, S.S.C<\/strong>, O\u2019Donnell, A.J., Prior, K.F., and van der Veen, D.R., Seasonal plasticity in daily timing of flight activity in Anopheles stephensi<\/em> is driven by temperature modulation of dawn entrainment<\/a>. Journal of the Royal Society, Proc B.  Phil. Trans. R. Soc. B<\/em>38020230343<\/em>.<\/p>\n\n\n\n

Ochomo E., Rund, SSC<\/strong>., Mthawanji, RS. et al. (2024) Mosquito control by abatement programmes in the United States: perspectives and lessons for countries in sub-Saharan Africa<\/a>. Malar J 23, 8.

Lippi CA, Rund SSC<\/strong>, Ryan SJ (2023). Characterizing the Vector Data Ecosystem<\/a>, Journal of Medical Entomology (Volume 60, Issue 2, March 2023, Pages 247\u2013254)

Hickner, P. V., Mori, A., Rund, SSC.,<\/strong> & Severson, D. W. (2022). Quantitative Trait Locus Determining the Time of Blood Feeding in Culex pipiens (Diptera: Culicidae). Journal of Medical Entomology, 59(5), 1500-1506.

Amos B, Aurrecoechea C, Barba M, Barreto A, Basenko EY, Belnap R, Blevins AS, B\u00f6hme U, Brestelli J, Brunk BP, Caddick M. , . . , Rund SSC<\/strong>, et al. (2022) VEuPathDB: The eukaryotic pathogen, vector and host bioinformatics resource center. Nucleic Acids Research. Jan 7;50(D1):D898-911.

Giraldo-Calder\u00f3n GI, Harb OS, Kelly SA, Rund SSC<\/strong>, Roos DS, McDowell MA. (2021) VectorBase.org updates: bioinformatic resources for invertebrate vectors of human pathogens and related organisms. Current Opinion in Insect Science. Dec 3.<\/p>\n\n\n\n

Rund, SSC<\/strong>, Labb, LF, Benefiel, OM, and Duffield, GE (2020) Artificial light at night increases Aedes aegypti<\/em> mosquito biting behavior with implications for arboviral disease transmission. The American Journal of Tropical Medicine and Hygiene 10.4269\/ajtmh.20-0885.<\/p>\n\n\n\n

Prior KF, O\u2019Donnell AJ, Rund SS<\/strong>, Savill NJ, van der Veen DR, Reece SE. (2019) Host circadian rhythms are disrupted during malaria infection in parasite genotype-specific manners. 2019 Jan 1:670240. Scientific Reports 9:10905.<\/p>\n\n\n\n

Imrie, L., Le Bihan, T, O’ Toole, \u00c1. Hickner, P.V., Dunn, W.A., Weise, B., Rund, S.S.C.<\/strong> (2019) Genome annotation improvements from cross-phyla proteogenomics and time-of-day differences in malaria mosquito proteins using untargeted quantitative proteomics.  PLoS ONE 14(7): e0220225.<\/p>\n\n\n\n

O\u2019Donnell, A.J. , Rund, S.S.C<\/strong>., and Reece, S.E. (2019) Time-of-day of blood feeding effects mosquito life history and malaria transmission. Parasites & Vectors. 12:301<\/p>\n\n\n\n

Rund, S.S.C<\/strong>. et al. (2019) MIReAD, a minimum information standard for reporting arthropod abundance data. Nature Scientific Data<\/em>. 6:40.<\/p>\n\n\n\n

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Rund, S.S.C<\/strong>., <\/strong>Moise, I.K., Beier, J.C., Martinez, M.E.  (2019). Rescuing troves of data to tackle emerging mosquito-borne diseases. Journal of the American Mosquito Control Association.<\/em> 35:75-83.<\/p>\n\n\n\n

This work has been featured in The Atlantic<\/em>, \u201cThe Case for Sharing All of America’s Data on Mosquitoes<\/a>\u201d, August 24, 2017<\/p>\n\n\n\n

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Hickner, P.V, Mori, A., Rund, S.S.C.,<\/strong> Shepperd, A.D., Cunningham, J.M., Chadee, D.D., Duffield, G.E., and Severson, D.W. (2019) Identification of QTL determining diel flight activity in male Culex pipiens<\/em> Journal of Heredity<\/em>, esz003, https:\/\/doi.org\/10.1093\/jhered\/esz003.<\/p>\n\n\n\n

Schneider, P ., Rund, S.S.C.<\/strong> ,<\/strong> Smith, N. L., Prior, K.F., O\u2019Donnell, A.J. and Reece, S.E. (2018). Adaptive periodicity in the infectivity of malaria gametocytes to mosquitoes. Royal Soc. Lond. 2<\/em>85: 20181876.<\/p>\n\n\n\n

Prior, K.F., van der Veen, D.R., O\u2019Donnell, A.J., Cumnock, K., Schneider, D., Pain, A., Subudhi, A., Ramaprasad, A., Rund, S.S.C.<\/strong>, Savill, N.J., and Reece, S.E. (2018). <\/em>Timing of host feeding drives rhythms in parasite replication. PloS Pathogens<\/em>. 14(2): e1006900.<\/p>\n\n\n\n

Hughes, M.E,  . . .Rund, S.S.C.<\/strong>, . . . , Hogenesch, et al. (2017) <\/em>Guidelines for genome-scale analysis of biological rhythms. Journal of Biological Rhythms 32:5.<\/p>\n\n\n\n

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Sheppard, A.D., Rund, S.S.C<\/strong>, George, G.F., Clark, E., Acri, D.J., and Duffield, G.E. (2017<\/em>). Light manipulation of mosquito behavior: Acute and sustained photic suppression of biting activity in the Anopheles gambiae<\/em>malaria mosquito. Parasites and Vectors <\/em>10:255.<\/p>\n\n\n\n

This work was featured on the BMC blog BugBitten<\/a>, Yahoo News, The New Zealand Herald<\/a>, The Mail Online, and elsewhere – Notre Dame press release<\/a><\/p>\n\n\n\n

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Gupta, V., Stewart, C.,Rund, S.S.C, <\/strong>Monteith, K., and Vale,P.F.(2017<\/em>) Costs and benefits of sub-lethal virus infection. Journal of Evolutionary Biology 30:7. <\/em><\/p>\n\n\n\n

Rund, S.S.C<\/strong>., Yoo, B, Alam, C.D.C., Green, T, Stephens, M.T., Zeng, E., George, G.F., Sheppard, A.D., Duffield, G.E., Milenkovi\u0107, T. (2016) Genome-wide profiling of 24 hr diel rhythmicity in the water flea, Daphnia pulex<\/em>; Network analysis reveals rhythmic gene expression and enhances functional gene annotation. BMC Genomics<\/em>17:653.<\/p>\n\n\n\n

Rund, S.S.C<\/strong>., O\u2019Donnell, A.J., Gentile J.E., Reece, S.E. (2016). Daily rhythms in mosquitoes and their consequences for malaria transmission. Insects<\/em>7:14.<\/p>\n\n\n\n

Champion, M. M., Sheppard, A. D., Rund, S.S.C<\/strong>., Freed, S. A., O\u2019Tousa, J. E., & Duffield, G. E. (2016). Qualitative and quantitative proteomics methods for the analysis of the Anopheles gambiae<\/em> mosquito proteome. In Short Views on Insect Genomics and Proteomics<\/em>(pp. 37-62). Springer International Publishing.<\/p>\n\n\n\n

Strelec, M. and Rund, S.S.C.<\/strong> <\/sup>(2015). Real-time visualization software for the TriKinetics Environmental Monitor (DEnM).Drosophila Information Service <\/em>98.<\/em><\/p>\n\n\n\n

Gentile J.E., Rund S.S.C.<\/strong>, Madey G. (2015) Modeling sterile insect technique to control the population of Anopheles gambiae<\/em>. Malaria Journal<\/em>14:92.<\/p>\n\n\n\n

Leming, M.T., Rund, S.S.C.,<\/strong>Behura, S.K. Duffield, G.E. and O’Tousa, J.E. (2014) A database of circadian and diel rhythmic gene expression in the yellow fever mosquito Aedes aegypti<\/em>. BMC Genomics<\/em>15:1128.<\/p>\n\n\n\n

Balmert N.J., Rund S.S.C.<\/strong>, Ghazi J.P., Zhou, P., and Duffield G.E. (2014)Time-of-day specific changes in metabolic detoxification and insecticide resistance in Anopheles gambiae<\/em>mosquitoes. Journal of Insect Physiology <\/em>64:30-39.<\/p>\n\n\n\n

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Rund S.S.C<\/strong>, Bonar N.A., Champion M.C., Ghazi J.P., Houk C.H., Leming M.L., Syed Z., and Duffield G.E. (2013) Daily rhythms in antennal protein and electroantennogram sensitivity in the Anopheles gambiae <\/em>malaria mosquito. Scientific Reports <\/em>3:2494<\/p>\n\n\n\n

This paper was featured on the AAAS Science Update podcast, Sept 20, 2013.<\/p>\n\n\n\n

This paper was featured on The Scientist\u2019s, \u201cSpeaking of Science\u201d feature, Oct. 1, 2013.<\/p>\n\n\n\n

Notre Dame press release<\/a><\/p>\n\n\n\n

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Keating  J.A., Bhattacharya D, Rund S.S.C.<\/strong>, Hoover S., Dasgupta R., Lee S.J., Duffield, G.E., and Striker, R. (2013) Mosquito protein kinase G phosphorylates flavivirus NS5 and alters flight behavior in Aedes aegypti<\/em> and Anopheles gambiae. <\/em>Vector-Bourne and Zoonotic Diseases<\/em>13:590-600.<\/p>\n\n\n\n

Notre Dame press release<\/a><\/p>\n\n\n\n

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Rund, S.S.C<\/strong>., Gentile, J.E., and Duffield, G.E.  (2013) Extensive circadian and light regulation of the transcriptome in the malaria mosquito Anopheles gambiae<\/em>. BMC Genomics <\/em>14: 218.<\/p>\n\n\n\n

Rund S.S.C.<\/strong>, Lee S.J., Bush B.R., Duffield, G.E. (2012) Strain- and sex-specific differences in daily flight activity and the circadian clock of Anopheles gambiae<\/em>mosquitoes.  Journal of Insect Physiology<\/em>. 58: 1609-1619.<\/p>\n\n\n\n

Gentile, J.E., Davis, GJ, and Rund, S.S.C.<\/strong>(2012) Verifying agent-based models with steady-state analysis. Computational & Mathematical Organization Theory18: 404-418.<\/p>\n\n\n\n

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Rund, S.S.C<\/strong>., Hou, T.Y., Ward, S.M., Collins, F.H. and Duffield, G.E. (2011) Genome-wide profiling of diel and circadian gene expression of the malaria vector Anopheles gambiae. Proceedings of the National Academy of Sciences USA<\/em>108 (32): E421-E430.<\/p>\n\n\n\n

This paper was featured  in the International Pest Control magazine. September\/October 2011, page 243.<\/p>\n\n\n\n

A figure from this paper is reproduced in the 3rd edition of Animal Physiology (Hill, Wyse, and Anderson, 2012).<\/p>\n\n\n\n

Notre Dame press release<\/a><\/p>\n\n\n\n

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Gentile, J.E. & Rund, S.S.C.<\/strong>(2011) A framework for modeling genetically-aware mosquito vectors for sterile insect technique. International Journal of Agent Technologies and Systems.<\/em>3 (3): 49-65.<\/p>\n\n\n\n

Shin J, Epperson K, Yanjanin NM, Albus J, Borgenheimer L, . . . Rund, S.<\/strong>, . . .  et al. (2011) Defining Natural History: Assessment of the Ability of College Students to Aid in Characterizing Clinical Progression of Niemann-Pick Disease, Type C. PLoS ONE<\/em>6(10): e23666.<\/p>\n","protected":false},"excerpt":{"rendered":"

View my profiles on: Google Scholar | ORCID | Research Gate Carmela D’Antuono, Kayla Anderson, Joseph Afuso, Jennifer Robichaud, and Samuel S. C. Rund, \u201cMosquito Abundance and Species Surveillance in St. Joseph County, Indiana, 1976-1997\u201d. Biodiversity Data Journal 12: e122215.   Rund, S.S.C, O\u2019Donnell, A.J., Prior, K.F., and van der Veen, D.R., Seasonal plasticity in daily timing of flight activity in Anopheles stephensi is driven by temperature […]<\/p>\n","protected":false},"author":2982,"featured_media":0,"parent":0,"menu_order":3,"comment_status":"closed","ping_status":"closed","template":"","meta":{"ngg_post_thumbnail":0,"footnotes":""},"class_list":["post-14","page","type-page","status-publish","hentry"],"_links":{"self":[{"href":"https:\/\/sites.nd.edu\/samuel-rund\/wp-json\/wp\/v2\/pages\/14","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/sites.nd.edu\/samuel-rund\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/sites.nd.edu\/samuel-rund\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/sites.nd.edu\/samuel-rund\/wp-json\/wp\/v2\/users\/2982"}],"replies":[{"embeddable":true,"href":"https:\/\/sites.nd.edu\/samuel-rund\/wp-json\/wp\/v2\/comments?post=14"}],"version-history":[{"count":21,"href":"https:\/\/sites.nd.edu\/samuel-rund\/wp-json\/wp\/v2\/pages\/14\/revisions"}],"predecessor-version":[{"id":255,"href":"https:\/\/sites.nd.edu\/samuel-rund\/wp-json\/wp\/v2\/pages\/14\/revisions\/255"}],"wp:attachment":[{"href":"https:\/\/sites.nd.edu\/samuel-rund\/wp-json\/wp\/v2\/media?parent=14"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}